Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glycosidase | DW204_01455 | Not Available | Negative | 393358 - 394842 | 56888.5 |
| endo-polygalacturonase | DW204_01460 | Not Available | Negative | 394864 - 396297 | 53427.2 |
| glycoside hydrolase family 92 | DW204_01465 | Not Available | Negative | 396304 - 397308 | 38255.5 |
| ion transporter | DW204_01470 | Not Available | Positive | 397852 - 398670 | 31592.2 |
| hypothetical protein | DW204_01475 | Not Available | Positive | 398674 - 399135 | 17572.1 |
| dna/rna non-specific endonuclease | DW204_01480 | Not Available | Positive | 399148 - 400071 | 35375.2 |
| abc transporter atp-binding protein | DW204_01490 | Not Available | Negative | 400369 - 401043 | 24711.8 |
| abc transporter permease | DW204_01495 | Not Available | Negative | 401069 - 403438 | 89055.3 |
| ahpc/tsa family protein | DW204_01500 | Not Available | Negative | 403462 - 405009 | 59279.0 |
| abc transporter permease | DW204_01505 | Not Available | Negative | 405046 - 407454 | 90475.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

