Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW204_01400 | Not Available | Negative | 380321 - 381232 | 35103.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DW204_01405 | Not Available | Negative | 381356 - 382366 | 35945.2 |
| glycoside hydrolase xylanase | DW204_01410 | Not Available | Negative | 382599 - 383552 | 35012.4 |
| spor domain-containing protein | DW204_01415 | Not Available | Negative | 383661 - 384155 | 17706.0 |
| ytxh domain-containing protein | DW204_01420 | Not Available | Positive | 384350 - 384553 | 7196.83 |
| phage holin family protein | DW204_01425 | Not Available | Positive | 384630 - 384998 | 14005.9 |
| hypothetical protein | DW204_01430 | Not Available | Positive | 385003 - 385272 | 10532.9 |
| peptidase s41 | DW204_01435 | Not Available | Positive | 385272 - 388529 | 123128.0 |
| glucuronyl hydrolase | DW204_01440 | Not Available | Negative | 388627 - 389847 | 45980.4 |
| glycoside hydrolase | DW204_01445 | Not Available | Negative | 389860 - 391512 | 62457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

