Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | DW204_01350 | Not Available | Negative | 367598 - 368443 | 31654.1 |
| glycogen synthase | DW204_01355 | Not Available | Positive | 368701 - 369516 | 31182.0 |
| duf4270 domain-containing protein | DW204_01360 | Not Available | Positive | 369545 - 371017 | 55167.3 |
| alpha-amylase | DW204_01365 | Not Available | Negative | 371086 - 372462 | 52521.9 |
| glycosyltransferase family 1 protein | DW204_01370 | Not Available | Negative | 372477 - 373748 | 48468.6 |
| 4-alpha-glucanotransferase | DW204_01375 | Not Available | Negative | 373764 - 375701 | 74420.7 |
| serine--trna ligase | DW204_01380 | Not Available | Negative | 375979 - 377253 | 47747.3 |
| hypothetical protein | DW204_01385 | Not Available | Negative | 377356 - 378573 | 46460.1 |
| 3-deoxy-8-phosphooctulonate synthase | DW204_01390 | Not Available | Negative | 378577 - 379380 | 29336.8 |
| lipid kinase | DW204_01395 | Not Available | Negative | 379382 - 380314 | 35257.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

