Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repb family plasmid replication initiator protein | DW204_14995 | Not Available | Negative | 3501928 - 3502932 | 39192.6 |
| hypothetical protein | DW204_15000 | Not Available | Negative | 3502883 - 3503068 | 7199.46 |
| site-specific integrase | DW204_15005 | Not Available | Positive | 3503390 - 3504316 | 36180.4 |
| transposase | DW204_15010 | Not Available | Negative | 3504964 - 3505071 | 4129.97 |
| is66 family transposase | DW204_15015 | Not Available | Negative | 3505082 - 3505262 | 6757.26 |
| is66 family transposase | DW204_15025 | Not Available | Negative | 3505732 - 3506452 | 27960.6 |
| is66 family transposase | DW204_15030 | Not Available | Negative | 3506635 - 3507194 | 21239.2 |
| hypothetical protein | DW204_15035 | Not Available | Positive | 3507327 - 3508541 | 46921.9 |
| hypothetical protein | DW204_15040 | Not Available | Positive | 3508538 - 3509857 | 51488.8 |
| hypothetical protein | DW204_15045 | Not Available | Positive | 3509847 - 3510887 | 39858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

