Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DW204_14940 | Not Available | Negative | 3494420 - 3495820 | 54519.6 |
| hypothetical protein | DW204_14945 | Not Available | Negative | 3496306 - 3496833 | 19160.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW204_14950 | Not Available | Negative | 3496864 - 3498414 | 58018.0 |
| hypothetical protein | DW204_14960 | Not Available | Positive | 3499221 - 3499472 | 9466.3 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DW204_14965 | Not Available | Positive | 3499469 - 3499744 | 10689.9 |
| hypothetical protein | DW204_14970 | Not Available | Positive | 3499755 - 3499952 | 7545.73 |
| hypothetical protein | DW204_14975 | Not Available | Positive | 3500141 - 3500440 | 11744.1 |
| mobilization protein | DW204_14980 | Not Available | Positive | 3500437 - 3501231 | 29372.9 |
| hypothetical protein | DW204_14985 | Not Available | Positive | 3501188 - 3501640 | 17541.8 |
| charged multivesicular body protein 2b-b | DW204_14990 | Not Available | Positive | 3501660 - 3501890 | 8337.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

