Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4313 domain-containing protein | DW204_14830 | Not Available | Negative | 3467228 - 3467845 | 23920.1 |
| hypothetical protein | DW204_14835 | Not Available | Negative | 3467903 - 3468781 | 34344.8 |
| hypothetical protein | DW204_14840 | Not Available | Negative | 3468785 - 3469954 | 45332.7 |
| hypothetical protein | DW204_14845 | Not Available | Positive | 3470308 - 3472150 | 70630.7 |
| l-rhamnose mutarotase | DW204_14850 | Not Available | Positive | 3472202 - 3472495 | 11465.5 |
| hybrid sensor histidine kinase/response regulator | DW204_14855 | Not Available | Positive | 3472594 - 3476904 | 163177.0 |
| asnc family transcriptional regulator | DW204_14860 | Not Available | Positive | 3477095 - 3477574 | 18141.0 |
| dihydrofolate reductase | DW204_14865 | Not Available | Negative | 3477586 - 3478080 | 18872.4 |
| 4fe-4s dicluster domain-containing protein | DW204_14870 | Not Available | Negative | 3478312 - 3478479 | 5631.56 |
| beta-n-acetylglucosaminidase | DW204_14875 | Not Available | Negative | 3478648 - 3481617 | 110346.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

