Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_14730 | Not Available | Negative | 3453074 - 3454090 | 40008.3 |
| hypothetical protein | DW204_14735 | Not Available | Negative | 3454197 - 3454700 | 19259.3 |
| lyttr family transcriptional regulator | DW204_14740 | Not Available | Negative | 3454713 - 3455075 | 13596.6 |
| arac family transcriptional regulator | DW204_14745 | Not Available | Negative | 3455347 - 3456213 | 33481.3 |
| sdr family nad(p)-dependent oxidoreductase | DW204_14750 | Not Available | Positive | 3456212 - 3457144 | 33068.9 |
| mannonate dehydratase | DW204_14755 | Not Available | Positive | 3457163 - 3458344 | 45094.1 |
| arac family transcriptional regulator | DW204_14760 | Not Available | Negative | 3458346 - 3459182 | 32117.6 |
| hypothetical protein | DW204_14765 | Not Available | Negative | 3459367 - 3459546 | 6629.29 |
| is4 family transposase | DW204_14770 | Not Available | Negative | 3459634 - 3460797 | 45713.1 |
| hypothetical protein | DW204_14775 | Not Available | Positive | 3460920 - 3461321 | 15315.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

