Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_14680 | Not Available | Negative | 3438374 - 3438822 | 16991.7 |
| hypothetical protein | DW204_14685 | Not Available | Negative | 3439175 - 3439945 | 29167.8 |
| port family protein | DW204_14690 | Not Available | Negative | 3439999 - 3440631 | 23908.8 |
| duf4249 domain-containing protein | DW204_14695 | Not Available | Negative | 3440666 - 3441631 | 36923.6 |
| tonb-dependent receptor | DW204_14700 | Not Available | Negative | 3441638 - 3444211 | 98093.9 |
| duf4974 domain-containing protein | DW204_14705 | Not Available | Negative | 3444211 - 3445026 | 30614.0 |
| rna polymerase sigma-70 factor | DW204_14710 | Not Available | Negative | 3445091 - 3445603 | 19993.1 |
| tonb-dependent receptor | DW204_14715 | Not Available | Positive | 3445907 - 3449080 | 117575.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_14720 | Not Available | Positive | 3449099 - 3450772 | 64146.5 |
| alpha-1,3/4-fucosidase | DW204_14725 | Not Available | Positive | 3450951 - 3452810 | 69603.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

