Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DW204_14565 | Not Available | Negative | 3411442 - 3412464 | 36935.5 |
| type i methionyl aminopeptidase | DW204_14570 | Not Available | Negative | 3412480 - 3413334 | 31728.1 |
| hypothetical protein | DW204_14575 | Not Available | Positive | 3413573 - 3413791 | 8355.73 |
| methyltransferase | DW204_14580 | Not Available | Negative | 3413840 - 3414511 | 24545.6 |
| hdig domain-containing protein | DW204_14590 | Not Available | Negative | 3415233 - 3417290 | 78674.6 |
| glutamate--trna ligase | DW204_14595 | Not Available | Positive | 3417376 - 3418893 | 58019.5 |
| 3-deoxy-d-manno-octulosonic acid transferase | DW204_14600 | Not Available | Positive | 3418902 - 3420122 | 46535.4 |
| gntr family transcriptional regulator | DW204_14605 | Not Available | Negative | 3420212 - 3420592 | 14765.9 |
| hypothetical protein | DW204_14610 | Not Available | Negative | 3420589 - 3421470 | 34167.5 |
| atp-binding cassette domain-containing protein | DW204_14615 | Not Available | Negative | 3421481 - 3422320 | 31238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

