Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease psta | DW204_01300 | Not Available | Negative | 356046 - 356915 | 31289.0 |
| phosphate abc transporter permease subunit pstc | DW204_01305 | Not Available | Negative | 356938 - 357795 | 30553.3 |
| phosphate abc transporter substrate-binding protein psts | DW204_01310 | Not Available | Negative | 357811 - 358869 | 37802.0 |
| hypothetical protein | DW204_01315 | Not Available | Negative | 358917 - 359960 | 38419.5 |
| alpha-n-arabinofuranosidase | DW204_01320 | Not Available | Negative | 360157 - 361695 | 58121.5 |
| endolytic transglycosylase mltg | DW204_01325 | Not Available | Positive | 361905 - 362930 | 38680.7 |
| trka family potassium uptake protein | DW204_01330 | Not Available | Negative | 362939 - 363628 | 25193.5 |
| potassium transporter | DW204_01335 | Not Available | Negative | 363632 - 365461 | 67482.3 |
| trpb-like pyridoxal phosphate-dependent enzyme | DW204_01340 | Not Available | Positive | 365646 - 367010 | 50185.9 |
| aspartate 1-decarboxylase | DW204_01345 | Not Available | Negative | 367241 - 367591 | 12766.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

