Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4857 domain-containing protein | DW204_14295 | Not Available | Negative | 3360168 - 3361409 | 47441.6 |
| hypothetical protein | DW204_14300 | Not Available | Negative | 3361422 - 3362096 | 25214.1 |
| abc transporter atp-binding protein | DW204_14305 | Not Available | Negative | 3362101 - 3362982 | 33792.0 |
| hypothetical protein | DW204_14310 | Not Available | Negative | 3363008 - 3364612 | 59970.4 |
| duf4876 domain-containing protein | DW204_14315 | Not Available | Negative | 3364615 - 3365940 | 48035.1 |
| tonb-dependent receptor | DW204_14320 | Not Available | Negative | 3365947 - 3368883 | 108866.0 |
| Trna-lys | Not Available | Not Available | Positive | 3369076 - 3369151 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3369183 - 3369258 | Not Available |
| port family protein | DW204_14335 | Not Available | Negative | 3369515 - 3370111 | 22034.4 |
| Trna-ser | Not Available | Not Available | Positive | 3371207 - 3371291 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

