Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DW204_14180 | Not Available | Negative | 3337985 - 3339337 | 49068.3 |
| conjugative transposon protein traj | DW204_14190 | Not Available | Negative | 3340288 - 3341292 | 37157.8 |
| duf4141 domain-containing protein | DW204_14195 | Not Available | Negative | 3341296 - 3341925 | 24177.4 |
| duf3876 domain-containing protein | DW204_14200 | Not Available | Negative | 3341949 - 3342329 | 14375.4 |
| trag family conjugative transposon atpase | DW204_14205 | Not Available | Negative | 3342370 - 3344874 | 96354.6 |
| duf4133 domain-containing protein | DW204_14210 | Not Available | Negative | 3344871 - 3345203 | 12696.9 |
| duf4134 domain-containing protein | DW204_14215 | Not Available | Negative | 3345214 - 3345531 | 10824.2 |
| conjugal transfer protein trad | DW204_14220 | Not Available | Negative | 3345733 - 3346461 | 27079.8 |
| duf3408 domain-containing protein | DW204_14225 | Not Available | Negative | 3346478 - 3346831 | 13677.4 |
| transposase | DW204_14230 | Not Available | Positive | 3346914 - 3347381 | 17901.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

