Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_14130 | Not Available | Positive | 3327991 - 3328722 | 28044.3 |
| lysm peptidoglycan-binding domain-containing protein | DW204_14135 | Not Available | Positive | 3328726 - 3329991 | 48033.9 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW204_14140 | Not Available | Positive | 3330070 - 3332349 | 86516.3 |
| dna-binding protein | DW204_14145 | Not Available | Positive | 3333087 - 3333359 | 10209.4 |
| hypothetical protein | DW204_14150 | Not Available | Positive | 3333353 - 3334537 | 46004.3 |
| hypothetical protein | DW204_14155 | Not Available | Negative | 3334581 - 3334979 | 15427.0 |
| duf3872 domain-containing protein | DW204_14160 | Not Available | Negative | 3334976 - 3335479 | 19169.8 |
| dna primase | DW204_14165 | Not Available | Negative | 3335476 - 3336378 | 33727.4 |
| conjugal transfer protein trao | DW204_14170 | Not Available | Negative | 3336386 - 3336961 | 21037.4 |
| conjugative transposon protein tran | DW204_14175 | Not Available | Negative | 3336964 - 3337950 | 37189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

