Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | DW204_14020 | Not Available | Positive | 3302009 - 3303268 | 48383.3 |
| hypothetical protein | DW204_14025 | Not Available | Negative | 3303363 - 3304409 | 39328.5 |
| hypothetical protein | DW204_14040 | Not Available | Negative | 3306262 - 3307677 | 55953.6 |
| mfs transporter | DW204_14045 | Not Available | Negative | 3307843 - 3309360 | 55097.3 |
| asma family protein | DW204_14050 | Not Available | Negative | 3309462 - 3312458 | 111512.0 |
| hypothetical protein | DW204_14055 | Not Available | Negative | 3312481 - 3313143 | 25518.7 |
| gliding motility-associated protein glde | DW204_14060 | Not Available | Negative | 3313146 - 3314507 | 51592.3 |
| single-stranded dna-binding protein | DW204_14065 | Not Available | Negative | 3314551 - 3314976 | 15543.3 |
| a/g-specific adenine glycosylase | DW204_14070 | Not Available | Negative | 3314981 - 3316045 | 41002.3 |
| integration host factor subunit beta | DW204_14075 | Not Available | Positive | 3316253 - 3316528 | 10026.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

