Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh peroxidase | DW204_01250 | Not Available | Positive | 344688 - 345239 | 20795.7 |
| duf418 domain-containing protein | DW204_01255 | Not Available | Negative | 345482 - 346666 | 45491.5 |
| preprotein translocase subunit secg | DW204_01260 | Not Available | Negative | 346789 - 347163 | 12946.8 |
| tetratricopeptide repeat protein | DW204_01265 | Not Available | Negative | 347170 - 347955 | 30398.8 |
| hypothetical protein | DW204_01270 | Not Available | Negative | 347967 - 348500 | 20189.7 |
| sigma-54-dependent fis family transcriptional regulator | DW204_01275 | Not Available | Negative | 348487 - 349806 | 48880.5 |
| carboxypeptidase-like regulatory domain-containing protein | DW204_01280 | Not Available | Negative | 349880 - 352534 | 101782.0 |
| inositol-3-phosphate synthase | DW204_01285 | Not Available | Negative | 352730 - 354037 | 48851.9 |
| ribokinase | DW204_01290 | Not Available | Positive | 354301 - 355206 | 33720.3 |
| phosphate abc transporter atp-binding protein | DW204_01295 | Not Available | Negative | 355288 - 356058 | 29136.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

