Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | DW204_13860 | Not Available | Positive | 3274258 - 3274698 | 16688.7 |
| rna polymerase subunit sigma-70 | DW204_13865 | Not Available | Negative | 3274942 - 3275460 | 20694.5 |
| hypothetical protein | DW204_13870 | Not Available | Negative | 3275629 - 3275970 | 12887.2 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_13875 | Not Available | Negative | 3276052 - 3278103 | 76417.0 |
| tonb-dependent receptor | DW204_13880 | Not Available | Negative | 3278138 - 3281467 | 123451.0 |
| duf4959 domain-containing protein | DW204_13885 | Not Available | Negative | 3281490 - 3282755 | 46158.9 |
| beta-xylosidase | DW204_13890 | Not Available | Negative | 3283088 - 3285583 | 95362.1 |
| hypothetical protein | DW204_13895 | Not Available | Negative | 3285726 - 3285947 | 8619.87 |
| hypothetical protein | DW204_13900 | Not Available | Positive | 3286045 - 3286455 | 14889.3 |
| hypothetical protein | DW204_13910 | Not Available | Positive | 3286617 - 3286832 | 7821.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

