Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | DW204_13705 | Not Available | Positive | 3243456 - 3244382 | 36177.3 |
| preprotein translocase subunit yajc | DW204_13710 | Not Available | Positive | 3244423 - 3244731 | 11212.9 |
| ybbr-like domain-containing protein | DW204_13715 | Not Available | Positive | 3244744 - 3245778 | 39247.9 |
| dephospho-coa kinase | DW204_13720 | Not Available | Positive | 3245775 - 3246380 | 22372.8 |
| hypothetical protein | DW204_13725 | Not Available | Positive | 3246446 - 3246859 | 15252.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DW204_13730 | Not Available | Positive | 3247010 - 3247519 | 19327.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DW204_13735 | Not Available | Positive | 3247523 - 3248563 | 38048.4 |
| adenosylcobinamide-gdp ribazoletransferase | DW204_13740 | Not Available | Positive | 3248568 - 3249314 | 27789.9 |
| cobyric acid synthase | DW204_13745 | Not Available | Positive | 3249334 - 3251352 | 74716.4 |
| pyridoxal phosphate-dependent class ii aminotransferase | DW204_13750 | Not Available | Positive | 3251345 - 3252358 | 37631.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

