Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | DW204_13655 | Not Available | Negative | 3232698 - 3234857 | 81308.7 |
| hypothetical protein | DW204_13660 | Not Available | Positive | 3235001 - 3235681 | 24659.3 |
| histidine--trna ligase | DW204_13665 | Not Available | Positive | 3235764 - 3237128 | 50211.7 |
| dna recombination protein rmuc | DW204_13670 | Not Available | Positive | 3237251 - 3238660 | 54043.4 |
| co-chaperone groes | DW204_13675 | Not Available | Positive | 3238946 - 3239218 | 9732.95 |
| chaperonin groel | DW204_13680 | Not Available | Positive | 3239261 - 3240898 | 58258.4 |
| rna-binding s4 domain-containing protein | DW204_13685 | Not Available | Negative | 3241081 - 3241509 | 16464.7 |
| aminoacyl-trna hydrolase | DW204_13690 | Not Available | Negative | 3241515 - 3242078 | 20808.3 |
| 50s ribosomal protein l25/general stress protein ctc | DW204_13695 | Not Available | Negative | 3242112 - 3242708 | 21654.7 |
| duf3276 family protein | DW204_13700 | Not Available | Negative | 3242901 - 3243275 | 14455.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

