Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_13605 | Not Available | Positive | 3220398 - 3221042 | 24988.0 |
| ompa family protein | DW204_13610 | Not Available | Positive | 3221350 - 3222489 | 41542.1 |
| tigr01212 family radical sam protein | DW204_13615 | Not Available | Positive | 3222656 - 3223600 | 36885.2 |
| fpra family a-type flavoprotein | DW204_13620 | Not Available | Positive | 3223630 - 3224820 | 44792.1 |
| mechanosensitive ion channel family protein | DW204_13625 | Not Available | Negative | 3224904 - 3225770 | 31721.9 |
| threonylcarbamoyl-amp synthase | DW204_13630 | Not Available | Negative | 3225802 - 3226413 | 22939.9 |
| helicase | DW204_13635 | Not Available | Negative | 3226463 - 3228463 | 76682.8 |
| mate family efflux transporter | DW204_13640 | Not Available | Positive | 3229035 - 3230402 | 49504.0 |
| crp/fnr family transcriptional regulator | DW204_13645 | Not Available | Positive | 3230792 - 3231358 | 22522.1 |
| acyltransferase | DW204_13650 | Not Available | Positive | 3231454 - 3232605 | 43013.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

