Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | DW204_13495 | Not Available | Negative | 3196499 - 3197755 | 46884.6 |
| l-glyceraldehyde 3-phosphate reductase | DW204_13500 | Not Available | Positive | 3197912 - 3198913 | 37435.8 |
| hlyc/corc family transporter | DW204_13505 | Not Available | Positive | 3199062 - 3200363 | 47699.1 |
| is1182-like element isbf4 family transposase | DW204_13510 | Not Available | Positive | 3200550 - 3202151 | 62743.3 |
| thymidine kinase | DW204_13515 | Not Available | Negative | 3202622 - 3203218 | 22215.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DW204_13520 | Not Available | Positive | 3203410 - 3204084 | 24989.3 |
| hypothetical protein | DW204_13525 | Not Available | Positive | 3204109 - 3204963 | 32321.3 |
| transposase | DW204_13535 | Not Available | Negative | 3206347 - 3206694 | 13437.4 |
| is66 family insertion sequence hypothetical protein | DW204_13540 | Not Available | Negative | 3206699 - 3207052 | 13301.9 |
| nad-dependent epimerase/dehydratase family protein | DW204_13550 | Not Available | Negative | 3208061 - 3209014 | 35154.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

