Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-sugar mutase | DW204_01200 | Not Available | Negative | 332099 - 333844 | 64433.4 |
| m23 family peptidase | DW204_01205 | Not Available | Positive | 334013 - 335674 | 62576.3 |
| dipeptidase | DW204_01210 | Not Available | Positive | 335717 - 337366 | 62143.9 |
| phosphate starvation-inducible protein phoh | DW204_01215 | Not Available | Positive | 337458 - 338456 | 37149.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DW204_01220 | Not Available | Positive | 338498 - 339445 | 35940.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DW204_01225 | Not Available | Positive | 339524 - 340264 | 27939.0 |
| shikimate dehydrogenase | DW204_01230 | Not Available | Positive | 340283 - 341026 | 27788.6 |
| alpha/beta hydrolase | DW204_01235 | Not Available | Positive | 341040 - 341993 | 36149.6 |
| nad(+) synthase | DW204_01240 | Not Available | Negative | 342078 - 344018 | 71673.4 |
| transcriptional repressor | DW204_01245 | Not Available | Positive | 344218 - 344640 | 16128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

