Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adaptor clps | DW204_13395 | Not Available | Positive | 3167055 - 3167363 | 11843.2 |
| aaa family atpase | DW204_13400 | Not Available | Positive | 3167378 - 3169594 | 83270.8 |
| leucyl/phenylalanyl-trna--protein transferase | DW204_13405 | Not Available | Positive | 3169605 - 3170246 | 24449.7 |
| proline--trna ligase | DW204_13410 | Not Available | Negative | 3170323 - 3171813 | 56961.1 |
| abc transporter permease | DW204_13415 | Not Available | Negative | 3171904 - 3173154 | 46445.0 |
| pyridoxal phosphate-dependent aminotransferase | DW204_13420 | Not Available | Negative | 3173151 - 3174353 | 45079.2 |
| fucose isomerase | DW204_13425 | Not Available | Positive | 3174559 - 3175797 | 46313.2 |
| duf4494 domain-containing protein | DW204_13430 | Not Available | Positive | 3175878 - 3176360 | 18232.6 |
| yggs family pyridoxal phosphate-dependent enzyme | DW204_13435 | Not Available | Positive | 3176379 - 3177047 | 25180.2 |
| dihydroorotate dehydrogenase-like protein | DW204_13440 | Not Available | Positive | 3177061 - 3178038 | 35776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

