Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | DW204_13340 | Not Available | Positive | 3153666 - 3154163 | 18865.7 |
| duf4858 domain-containing protein | DW204_13345 | Not Available | Positive | 3154216 - 3155142 | 35675.6 |
| hypothetical protein | DW204_13350 | Not Available | Negative | 3155156 - 3155530 | 14418.1 |
| had family hydrolase | DW204_13355 | Not Available | Positive | 3155824 - 3156456 | 23659.1 |
| nudix hydrolase | DW204_13360 | Not Available | Positive | 3156440 - 3156985 | 20949.2 |
| hypothetical protein | DW204_13370 | Not Available | Negative | 3158349 - 3161783 | 129996.0 |
| exonuclease sbccd subunit d | DW204_13375 | Not Available | Negative | 3161787 - 3163001 | 46203.9 |
| s9 family peptidase | DW204_13380 | Not Available | Negative | 3163007 - 3165451 | 91462.4 |
| m48 family peptidase | DW204_13385 | Not Available | Positive | 3165536 - 3166330 | 29002.1 |
| glycine zipper family protein | DW204_13390 | Not Available | Positive | 3166353 - 3167021 | 23566.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

