Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DW204_13290 | Not Available | Positive | 3139537 - 3140178 | 23997.7 |
| glycine dehydrogenase (aminomethyl-transferring) | DW204_13295 | Not Available | Positive | 3140225 - 3143074 | 104174.0 |
| phenylacetate--coa ligase | DW204_13300 | Not Available | Positive | 3143349 - 3144647 | 49265.7 |
| amino acid-binding protein | DW204_13305 | Not Available | Positive | 3144660 - 3145088 | 15834.2 |
| gtra family protein | DW204_13310 | Not Available | Negative | 3145085 - 3145474 | 15086.8 |
| aspartate--trna ligase | DW204_13315 | Not Available | Negative | 3145510 - 3147273 | 66652.1 |
| thioredoxin-disulfide reductase | DW204_13320 | Not Available | Positive | 3147488 - 3148435 | 33757.3 |
| insulinase family protein | DW204_13325 | Not Available | Positive | 3148469 - 3151288 | 106073.0 |
| hypothetical protein | DW204_13330 | Not Available | Positive | 3151367 - 3152800 | 54877.6 |
| abc transporter atp-binding protein | DW204_13335 | Not Available | Positive | 3152832 - 3153539 | 26665.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

