Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase liga | DW204_13240 | Not Available | Negative | 3130117 - 3132117 | 75708.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DW204_13245 | Not Available | Positive | 3132191 - 3132871 | 25813.0 |
| smi1/knr4 family protein | DW204_13250 | Not Available | Positive | 3133161 - 3133565 | 15349.1 |
| hypothetical protein | DW204_13255 | Not Available | Positive | 3134298 - 3134735 | 17083.1 |
| hypothetical protein | DW204_13260 | Not Available | Positive | 3135113 - 3135484 | 14153.0 |
| sugar o-acetyltransferase | DW204_13265 | Not Available | Negative | 3135733 - 3136296 | 20624.0 |
| hypothetical protein | DW204_13270 | Not Available | Positive | 3136494 - 3137180 | 26635.7 |
| lipoyl(octanoyl) transferase lipb | DW204_13275 | Not Available | Negative | 3137209 - 3137874 | 25234.4 |
| duf3298 domain-containing protein | DW204_13280 | Not Available | Positive | 3138032 - 3138898 | 32126.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DW204_13285 | Not Available | Positive | 3138905 - 3139531 | 23805.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

