Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DW204_13140 | Not Available | Positive | 3115655 - 3116653 | 37246.8 |
| vwa domain-containing protein | DW204_13145 | Not Available | Positive | 3116665 - 3117684 | 37833.1 |
| tetratricopeptide repeat protein | DW204_13150 | Not Available | Positive | 3117720 - 3118394 | 26212.8 |
| protein batd | DW204_13155 | Not Available | Positive | 3118442 - 3120271 | 67070.2 |
| tetratricopeptide repeat protein | DW204_13160 | Not Available | Positive | 3120296 - 3121048 | 27999.9 |
| phosphatase pap2 family protein | DW204_13165 | Not Available | Positive | 3121064 - 3121774 | 26440.8 |
| dna-binding protein | DW204_13170 | Not Available | Positive | 3121893 - 3122150 | 9421.32 |
| universal stress protein | DW204_13175 | Not Available | Positive | 3122254 - 3123378 | 42866.9 |
| Trna-arg | Not Available | Not Available | Positive | 3124040 - 3124116 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3124143 - 3124216 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

