Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2807 domain-containing protein | DW204_13085 | Not Available | Negative | 3104535 - 3105161 | 22325.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW204_13090 | Not Available | Negative | 3105175 - 3106425 | 47984.5 |
| tolc family protein | DW204_13095 | Not Available | Negative | 3106451 - 3107965 | 57966.3 |
| sigma-54-dependent fis family transcriptional regulator | DW204_13100 | Not Available | Positive | 3108034 - 3109407 | 51685.9 |
| pas domain-containing sensor histidine kinase | DW204_13105 | Not Available | Positive | 3109397 - 3110701 | 48999.6 |
| hypothetical protein | DW204_13110 | Not Available | Negative | 3110776 - 3111222 | 17089.7 |
| naat family transporter | DW204_13115 | Not Available | Negative | 3111389 - 3112033 | 23846.3 |
| atpase | DW204_13125 | Not Available | Positive | 3112516 - 3113511 | 37201.3 |
| duf58 domain-containing protein | DW204_13130 | Not Available | Positive | 3113653 - 3114522 | 33716.3 |
| hypothetical protein | DW204_13135 | Not Available | Positive | 3114561 - 3115634 | 40538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

