Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | DW204_13035 | Not Available | Negative | 3091184 - 3092011 | 31513.0 |
| holliday junction branch migration protein ruva | DW204_13040 | Not Available | Negative | 3092240 - 3092836 | 21320.2 |
| diaminopimelate dehydrogenase | DW204_13045 | Not Available | Positive | 3093008 - 3093907 | 32254.9 |
| sdr family nad(p)-dependent oxidoreductase | DW204_13050 | Not Available | Negative | 3093977 - 3094822 | 31353.3 |
| nadh:flavin oxidoreductase | DW204_13055 | Not Available | Negative | 3094824 - 3096047 | 45371.4 |
| duf1295 domain-containing protein | DW204_13060 | Not Available | Negative | 3096062 - 3096829 | 29236.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DW204_13065 | Not Available | Negative | 3097051 - 3098895 | 66838.8 |
| superoxide dismutase | DW204_13070 | Not Available | Positive | 3099106 - 3099678 | 21877.0 |
| abc transporter permease | DW204_13075 | Not Available | Negative | 3099750 - 3102107 | 88543.1 |
| abc transporter permease | DW204_13080 | Not Available | Negative | 3102139 - 3104499 | 89101.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

