Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_12925 | Not Available | Negative | 3063665 - 3064663 | 38249.1 |
| hypothetical protein | DW204_12930 | Not Available | Negative | 3064675 - 3065124 | 17008.0 |
| tetratricopeptide repeat protein | DW204_12935 | Not Available | Negative | 3065184 - 3066173 | 36455.3 |
| preprotein translocase subunit seca | DW204_12940 | Not Available | Negative | 3066318 - 3069614 | 125229.0 |
| alkaline phosphatase family protein | DW204_12945 | Not Available | Negative | 3069704 - 3071287 | 59885.5 |
| duf4105 domain-containing protein | DW204_12950 | Not Available | Negative | 3071287 - 3072495 | 46742.1 |
| type iii pantothenate kinase | DW204_12955 | Not Available | Positive | 3072677 - 3073402 | 26814.8 |
| hypothetical protein | DW204_12960 | Not Available | Positive | 3073392 - 3074663 | 47156.7 |
| hypothetical protein | DW204_12965 | Not Available | Positive | 3074703 - 3076064 | 50305.8 |
| lps export abc transporter periplasmic protein lptc | DW204_12970 | Not Available | Positive | 3076069 - 3076689 | 23805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

