Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW204_12875 | Not Available | Positive | 3050617 - 3051384 | 28683.9 |
| duf2723 domain-containing protein | DW204_12880 | Not Available | Positive | 3051496 - 3054828 | 126997.0 |
| polysaccharide deacetylase family protein | DW204_12885 | Not Available | Positive | 3054968 - 3055579 | 24393.6 |
| duf4861 domain-containing protein | DW204_12890 | Not Available | Negative | 3055647 - 3056882 | 45251.2 |
| gluconate 5-dehydrogenase | DW204_12895 | Not Available | Negative | 3056977 - 3057771 | 28099.0 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DW204_12900 | Not Available | Negative | 3057977 - 3059392 | 52786.7 |
| dihydrolipoyl dehydrogenase | DW204_12905 | Not Available | Negative | 3059406 - 3060746 | 48207.7 |
| hypothetical protein | DW204_12910 | Not Available | Negative | 3060771 - 3061163 | 15135.9 |
| hypothetical protein | DW204_12915 | Not Available | Negative | 3061191 - 3061685 | 19660.2 |
| l-aspartate oxidase | DW204_12920 | Not Available | Positive | 3061791 - 3063377 | 59225.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

