Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | DW204_12775 | Not Available | Positive | 3027015 - 3028010 | 36365.9 |
| indole-3-glycerol phosphate synthase trpc | DW204_12780 | Not Available | Positive | 3028018 - 3028806 | 28904.9 |
| phosphoribosylanthranilate isomerase | DW204_12785 | Not Available | Positive | 3028803 - 3029426 | 23305.6 |
| tryptophan synthase subunit alpha | DW204_12790 | Not Available | Positive | 3029439 - 3030218 | 29199.4 |
| type i asparaginase | DW204_12795 | Not Available | Positive | 3030305 - 3031354 | 38750.0 |
| dna-binding response regulator | DW204_12800 | Not Available | Positive | 3031458 - 3032144 | 26192.0 |
| two-component sensor histidine kinase | DW204_12805 | Not Available | Positive | 3032162 - 3033949 | 69011.0 |
| hypothetical protein | DW204_12810 | Not Available | Negative | 3034112 - 3034543 | 17064.7 |
| hypothetical protein | DW204_12815 | Not Available | Negative | 3034624 - 3035049 | 15883.5 |
| hypothetical protein | DW204_12820 | Not Available | Negative | 3035287 - 3035814 | 18700.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

