Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_12725 | Not Available | Negative | 3017590 - 3017808 | 8098.9 |
| laci family transcriptional regulator | DW204_12730 | Not Available | Positive | 3017959 - 3018612 | 24537.9 |
| thiol peroxidase | DW204_12735 | Not Available | Positive | 3018872 - 3019426 | 19865.7 |
| acyloxyacyl hydrolase | DW204_12740 | Not Available | Negative | 3019446 - 3020678 | 45585.7 |
| hypothetical protein | DW204_12745 | Not Available | Negative | 3020665 - 3021660 | 37671.6 |
| 50s ribosomal protein l11 methyltransferase | DW204_12750 | Not Available | Positive | 3021893 - 3022738 | 31452.2 |
| dna alkylation repair protein | DW204_12755 | Not Available | Negative | 3022768 - 3023478 | 27754.7 |
| tryptophan synthase subunit beta | DW204_12760 | Not Available | Positive | 3023790 - 3024986 | 43865.9 |
| anthranilate synthase component i family protein | DW204_12765 | Not Available | Positive | 3024999 - 3026399 | 52677.2 |
| aminodeoxychorismate/anthranilate synthase component ii | DW204_12770 | Not Available | Positive | 3026406 - 3026972 | 21080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

