Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin | DW204_12675 | Not Available | Positive | 3006176 - 3006622 | 15404.2 |
| site-specific integrase | DW204_12680 | Not Available | Positive | 3006921 - 3008057 | 43598.9 |
| lysozyme | DW204_12685 | Not Available | Positive | 3008138 - 3008320 | 7225.06 |
| glpgli family protein | DW204_12690 | Not Available | Positive | 3008480 - 3009319 | 32406.9 |
| hypothetical protein | DW204_12695 | Not Available | Positive | 3009329 - 3011896 | 97012.1 |
| peptidase s41 | DW204_12700 | Not Available | Positive | 3012023 - 3013294 | 48316.4 |
| tonb-dependent receptor | DW204_12705 | Not Available | Positive | 3013533 - 3015860 | 86812.2 |
| hypothetical protein | DW204_12710 | Not Available | Positive | 3015864 - 3016214 | 13401.3 |
| luxr family transcriptional regulator | DW204_12715 | Not Available | Negative | 3016155 - 3016916 | 29439.3 |
| hypothetical protein | DW204_12720 | Not Available | Positive | 3017122 - 3017466 | 13412.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

