Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DW204_12625 | Not Available | Negative | 2990682 - 2991305 | 23497.6 |
| hydroxylamine reductase | DW204_12630 | Not Available | Positive | 2991420 - 2993072 | 60576.1 |
| m20/m25/m40 family metallo-hydrolase | DW204_12635 | Not Available | Negative | 2993077 - 2994093 | 37891.8 |
| tonb-dependent receptor | DW204_12640 | Not Available | Negative | 2994140 - 2996047 | 70862.8 |
| hypothetical protein | DW204_12645 | Not Available | Negative | 2996178 - 2996489 | 11296.4 |
| cupin domain-containing protein | DW204_12650 | Not Available | Negative | 2996575 - 2997954 | 52121.4 |
| duf4011 domain-containing protein | DW204_12655 | Not Available | Negative | 2998012 - 3003381 | 205050.0 |
| atp-binding protein | DW204_12660 | Not Available | Negative | 3003422 - 3004612 | 45692.8 |
| nicotinamide riboside transporter pnuc | DW204_12665 | Not Available | Positive | 3004772 - 3005374 | 23500.9 |
| thiamine diphosphokinase | DW204_12670 | Not Available | Positive | 3005380 - 3006042 | 24528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

