Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | DW204_12525 | Not Available | Positive | 2967978 - 2968484 | 19319.4 |
| ppx/gppa family phosphatase | DW204_12530 | Not Available | Negative | 2968572 - 2969558 | 37212.3 |
| rna degradosome polyphosphate kinase | DW204_12535 | Not Available | Negative | 2969574 - 2971643 | 79509.3 |
| glycosyltransferase | DW204_12540 | Not Available | Negative | 2971714 - 2972832 | 43163.2 |
| udp-2,3-diacylglucosamine diphosphatase | DW204_12545 | Not Available | Negative | 2972829 - 2973638 | 31244.4 |
| type ii toxin-antitoxin system hicb family antitoxin | DW204_12550 | Not Available | Negative | 2973837 - 2974028 | 7387.28 |
| glycoside hydrolase family 16 protein | DW204_12555 | Not Available | Negative | 2974225 - 2975034 | 30765.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_12560 | Not Available | Negative | 2975116 - 2976738 | 61027.6 |
| tonb-dependent receptor | DW204_12565 | Not Available | Negative | 2976757 - 2979855 | 115251.0 |
| hypothetical protein | DW204_12570 | Not Available | Negative | 2980316 - 2980906 | 22322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

