Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | DW204_12475 | Not Available | Positive | 2954760 - 2956454 | 61152.4 |
| helix-hairpin-helix domain-containing protein | DW204_12480 | Not Available | Negative | 2956678 - 2958645 | 77081.6 |
| duf4294 domain-containing protein | DW204_12485 | Not Available | Positive | 2958855 - 2959406 | 21321.2 |
| trmh family rna methyltransferase | DW204_12490 | Not Available | Negative | 2959460 - 2960005 | 20422.8 |
| quinolinate synthase nada | DW204_12495 | Not Available | Positive | 2960457 - 2961449 | 36683.5 |
| Trna-asp | Not Available | Not Available | Positive | 2962066 - 2962142 | Not Available |
| hypothetical protein | DW204_12505 | Not Available | Negative | 2962253 - 2962555 | 10918.0 |
| leucine-rich repeat domain-containing protein | DW204_12510 | Not Available | Positive | 2962923 - 2964320 | 51351.1 |
| radical sam protein | DW204_12515 | Not Available | Negative | 2964388 - 2965167 | 29220.2 |
| dna mismatch repair protein muts | DW204_12520 | Not Available | Negative | 2965180 - 2967768 | 97218.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

