Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5110 domain-containing protein | DW204_12420 | Not Available | Positive | 2936080 - 2938758 | 101057.0 |
| sialate o-acetylesterase | DW204_12425 | Not Available | Positive | 2938802 - 2939671 | 31310.8 |
| response regulator | DW204_12430 | Not Available | Negative | 2939731 - 2943912 | 158824.0 |
| sialate o-acetylesterase | DW204_12435 | Not Available | Positive | 2944174 - 2945796 | 61425.2 |
| mfs transporter | DW204_12440 | Not Available | Positive | 2945806 - 2947302 | 55062.4 |
| 1,4-beta-xylanase | DW204_12445 | Not Available | Positive | 2947318 - 2948466 | 43550.2 |
| alpha-n-arabinofuranosidase | DW204_12450 | Not Available | Positive | 2948516 - 2949493 | 37104.5 |
| alpha-glucuronidase | DW204_12455 | Not Available | Positive | 2949486 - 2951498 | 76367.9 |
| phosphopyruvate hydratase | DW204_12465 | Not Available | Negative | 2952389 - 2953669 | 46160.1 |
| rubrerythrin family protein | DW204_12470 | Not Available | Negative | 2953834 - 2954412 | 21713.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

