Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_12365 | Not Available | Negative | 2919848 - 2920576 | 27664.3 |
| hypothetical protein | DW204_12370 | Not Available | Negative | 2920853 - 2921272 | 16457.0 |
| glycoside hydrolase family 43 protein | DW204_12380 | Not Available | Negative | 2921712 - 2923424 | 63029.4 |
| esterase family protein | DW204_12385 | Not Available | Positive | 2923776 - 2924645 | 33066.5 |
| glycoside hydrolase family 95 protein | DW204_12390 | Not Available | Positive | 2924667 - 2927117 | 91679.2 |
| glycoside hydrolase | DW204_12395 | Not Available | Positive | 2927157 - 2928764 | 60719.3 |
| hypothetical protein | DW204_12400 | Not Available | Positive | 2928803 - 2931193 | 90679.6 |
| glycoside hydrolase family 97 protein | DW204_12405 | Not Available | Positive | 2931263 - 2933230 | 72738.8 |
| carbohydrate-binding protein | DW204_12410 | Not Available | Positive | 2933305 - 2934630 | 50293.1 |
| carbohydrate-binding protein | DW204_12415 | Not Available | Positive | 2934726 - 2936063 | 50044.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

