Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2075 domain-containing protein | DW204_12275 | Not Available | Positive | 2902001 - 2904370 | 89428.4 |
| duf4143 domain-containing protein | DW204_12285 | Not Available | Negative | 2907168 - 2908466 | 49777.3 |
| hypothetical protein | DW204_12290 | Not Available | Positive | 2908627 - 2908812 | 7105.65 |
| bile acid:sodium symporter family protein | DW204_12320 | Not Available | Positive | 2912471 - 2913415 | 33027.8 |
| zn-dependent hydrolase | DW204_12325 | Not Available | Negative | 2913521 - 2915170 | 61816.5 |
| hypothetical protein | DW204_12335 | Not Available | Positive | 2915662 - 2916330 | 25869.8 |
| dmt family transporter | DW204_12345 | Not Available | Positive | 2916862 - 2917752 | 31378.8 |
| exonuclease | DW204_12350 | Not Available | Positive | 2917775 - 2918266 | 18611.8 |
| glycerate kinase | DW204_12355 | Not Available | Positive | 2918277 - 2919350 | 38001.5 |
| hypothetical protein | DW204_12360 | Not Available | Positive | 2919389 - 2919760 | 14127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

