Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system thif family protein | DW204_12220 | Not Available | Positive | 2889757 - 2890539 | 29278.4 |
| dna-binding protein | DW204_12225 | Not Available | Negative | 2890595 - 2890900 | 11751.3 |
| metallophosphatase | DW204_12230 | Not Available | Negative | 2891312 - 2892082 | 30001.8 |
| hypothetical protein | DW204_12235 | Not Available | Negative | 2892256 - 2893683 | 55321.4 |
| tir domain-containing protein | DW204_12240 | Not Available | Negative | 2893690 - 2894907 | 46497.1 |
| nacht domain-containing protein | DW204_12245 | Not Available | Negative | 2894900 - 2898832 | 153741.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | DW204_12250 | Not Available | Negative | 2898889 - 2899716 | 32418.0 |
| hypothetical protein | DW204_12255 | Not Available | Negative | 2899713 - 2900339 | 23934.1 |
| hypothetical protein | DW204_12260 | Not Available | Negative | 2900609 - 2900818 | 7937.73 |
| nucleotide pyrophosphohydrolase | DW204_12270 | Not Available | Positive | 2901663 - 2902004 | 13085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

