Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW204_12055 | Not Available | Negative | 2859548 - 2859919 | 14613.8 |
| hypothetical protein | DW204_12060 | Not Available | Negative | 2859926 - 2860306 | 14749.1 |
| hypothetical protein | DW204_12065 | Not Available | Negative | 2860410 - 2861009 | 22661.8 |
| hypothetical protein | DW204_12070 | Not Available | Negative | 2861011 - 2862051 | 39325.5 |
| dtdp-glucose 4,6-dehydratase | DW204_12075 | Not Available | Negative | 2862211 - 2863356 | 44225.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW204_12080 | Not Available | Negative | 2863369 - 2863938 | 21700.7 |
| udp-galactopyranose mutase | DW204_12090 | Not Available | Negative | 2864845 - 2865972 | 43613.0 |
| nucleotide sugar dehydrogenase | DW204_12095 | Not Available | Negative | 2866040 - 2867368 | 49784.2 |
| duf4276 family protein | DW204_12100 | Not Available | Negative | 2867388 - 2868116 | 28229.8 |
| atp-binding protein | DW204_12105 | Not Available | Negative | 2868134 - 2869183 | 40465.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

