Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | DW204_11880 | Not Available | Negative | 2825698 - 2826771 | 40791.7 |
| xre family transcriptional regulator | DW204_11885 | Not Available | Negative | 2826781 - 2827011 | 8698.62 |
| hypothetical protein | DW204_11895 | Not Available | Negative | 2827904 - 2828692 | 31043.7 |
| hypothetical protein | DW204_11900 | Not Available | Negative | 2828829 - 2829425 | 22609.1 |
| dna mismatch endonuclease vsr | DW204_11905 | Not Available | Positive | 2829716 - 2830231 | 20564.8 |
| mbl fold metallo-hydrolase | DW204_11910 | Not Available | Negative | 2830313 - 2831092 | 30173.9 |
| hypothetical protein | DW204_11915 | Not Available | Negative | 2831158 - 2834628 | 132578.0 |
| hypothetical protein | DW204_11920 | Not Available | Negative | 2834703 - 2835578 | 34006.9 |
| atp-binding protein | DW204_11925 | Not Available | Negative | 2835582 - 2839253 | 143984.0 |
| hypothetical protein | DW204_11930 | Not Available | Negative | 2839237 - 2839785 | 21249.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

