Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW204_11825 | Not Available | Positive | 2811770 - 2813056 | 46763.5 |
| paai family thioesterase | DW204_11830 | Not Available | Negative | 2813132 - 2813542 | 14780.7 |
| duf2027 domain-containing protein | DW204_11835 | Not Available | Negative | 2813548 - 2814600 | 40272.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DW204_11840 | Not Available | Positive | 2814752 - 2815969 | 46219.1 |
| nudix domain-containing protein | DW204_11845 | Not Available | Positive | 2815988 - 2816491 | 18950.1 |
| nucleoside deaminase | DW204_11850 | Not Available | Negative | 2816681 - 2817148 | 17074.3 |
| hypothetical protein | DW204_11860 | Not Available | Negative | 2818281 - 2820398 | 80782.9 |
| pd-(d/e)xk motif protein | DW204_11865 | Not Available | Negative | 2820411 - 2821322 | 34859.4 |
| endonuclease | DW204_11870 | Not Available | Negative | 2821312 - 2824203 | 112080.0 |
| atp-binding protein | DW204_11875 | Not Available | Negative | 2824190 - 2825695 | 58023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

