Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase small subunit | DW204_11775 | Not Available | Positive | 2798196 - 2800106 | 70416.1 |
| methylmalonyl-coa mutase | DW204_11780 | Not Available | Positive | 2800115 - 2802268 | 79470.1 |
| hypothetical protein | DW204_11785 | Not Available | Positive | 2802454 - 2803122 | 25407.8 |
| abc transporter permease | DW204_11790 | Not Available | Negative | 2803216 - 2804469 | 46175.6 |
| atp-binding cassette domain-containing protein | DW204_11795 | Not Available | Negative | 2804488 - 2805405 | 34856.0 |
| ncs2 family permease | DW204_11800 | Not Available | Negative | 2805760 - 2807046 | 45705.7 |
| duf5020 family protein | DW204_11805 | Not Available | Negative | 2807083 - 2807787 | 27409.4 |
| alpha-l-fucosidase | DW204_11810 | Not Available | Positive | 2807903 - 2809993 | 79303.2 |
| methylenetetrahydrofolate reductase | DW204_11815 | Not Available | Negative | 2810007 - 2810960 | 36084.5 |
| lrp/asnc family transcriptional regulator | DW204_11820 | Not Available | Negative | 2811136 - 2811606 | 18146.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

