Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | DW204_11725 | Not Available | Negative | 2783525 - 2785492 | 74538.6 |
| dna helicase recq | DW204_11730 | Not Available | Positive | 2785680 - 2787503 | 69067.4 |
| hypothetical protein | DW204_11735 | Not Available | Negative | 2787500 - 2789164 | 61831.9 |
| sodium ion-translocating decarboxylase subunit beta | DW204_11740 | Not Available | Negative | 2789317 - 2790552 | 44260.9 |
| oxaloacetate decarboxylase | DW204_11745 | Not Available | Negative | 2790552 - 2792411 | 69037.6 |
| oxaloacetate decarboxylase | DW204_11750 | Not Available | Negative | 2792441 - 2792698 | 8942.43 |
| nitroreductase | DW204_11755 | Not Available | Negative | 2792843 - 2793346 | 19126.1 |
| duf2490 domain-containing protein | DW204_11760 | Not Available | Negative | 2793358 - 2794020 | 25794.5 |
| hypothetical protein | DW204_11765 | Not Available | Positive | 2794289 - 2795926 | 60708.4 |
| putative transporter | DW204_11770 | Not Available | Negative | 2796225 - 2797904 | 60670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

