Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | DW204_11625 | Not Available | Negative | 2758972 - 2760309 | 48822.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DW204_11630 | Not Available | Negative | 2760306 - 2762213 | 70074.5 |
| gscfa domain protein | DW204_11635 | Not Available | Positive | 2762297 - 2763283 | 38481.5 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DW204_11640 | Not Available | Positive | 2763259 - 2765724 | 92412.0 |
| lysine exporter lyso family protein | DW204_11645 | Not Available | Negative | 2765816 - 2766418 | 21512.9 |
| duf340 domain-containing protein | DW204_11650 | Not Available | Negative | 2766415 - 2766693 | 10132.1 |
| hypothetical protein | DW204_11655 | Not Available | Negative | 2766883 - 2767362 | 18678.4 |
| sigma-70 family rna polymerase sigma factor | DW204_11660 | Not Available | Negative | 2767352 - 2767861 | 19949.8 |
| acetylglutamate kinase | DW204_11665 | Not Available | Negative | 2767927 - 2768700 | 27540.3 |
| biosynthetic arginine decarboxylase | DW204_11670 | Not Available | Negative | 2768718 - 2770610 | 71548.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

