Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | DW204_11575 | Not Available | Negative | 2745853 - 2748291 | 91244.5 |
| hybrid sensor histidine kinase/response regulator | DW204_11580 | Not Available | Positive | 2748892 - 2752854 | 150854.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DW204_11585 | Not Available | Positive | 2752896 - 2754128 | 45503.9 |
| phospholipase | DW204_11590 | Not Available | Positive | 2754140 - 2754559 | 16377.6 |
| metal abc transporter permease | DW204_11595 | Not Available | Positive | 2754574 - 2755395 | 29757.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DW204_11600 | Not Available | Positive | 2755428 - 2755856 | 16286.1 |
| hypothetical protein | DW204_11605 | Not Available | Positive | 2755859 - 2756080 | 8351.5 |
| ribonuclease hii | DW204_11610 | Not Available | Negative | 2756155 - 2756757 | 22343.9 |
| duf3109 family protein | DW204_11615 | Not Available | Positive | 2756889 - 2757470 | 22184.6 |
| hypothetical protein | DW204_11620 | Not Available | Negative | 2757535 - 2758869 | 49499.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

