Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | DW204_11470 | Not Available | Negative | 2713656 - 2715761 | 82224.1 |
| type i restriction-modification system subunit m | DW204_11475 | Not Available | Negative | 2715779 - 2717335 | 58860.7 |
| hypothetical protein | DW204_11480 | Not Available | Negative | 2717339 - 2717995 | 24685.0 |
| type i restriction endonuclease subunit r | DW204_11485 | Not Available | Negative | 2718009 - 2720873 | 110799.0 |
| xre family transcriptional regulator | DW204_11490 | Not Available | Negative | 2720909 - 2721205 | 11195.8 |
| hypothetical protein | DW204_11495 | Not Available | Negative | 2721400 - 2722371 | 38155.4 |
| rlob domain-containing protein | DW204_11500 | Not Available | Negative | 2722498 - 2723028 | 20795.5 |
| atp-binding protein | DW204_11505 | Not Available | Negative | 2723076 - 2724476 | 52733.3 |
| hypothetical protein | DW204_11510 | Not Available | Negative | 2724808 - 2725515 | 27760.9 |
| duf3828 domain-containing protein | DW204_11515 | Not Available | Positive | 2726102 - 2726935 | 31775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

