Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4836 family protein | DW204_11370 | Not Available | Negative | 2688361 - 2689866 | 55642.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DW204_11375 | Not Available | Negative | 2689891 - 2690592 | 26407.0 |
| hypothetical protein | DW204_11380 | Not Available | Negative | 2690597 - 2691301 | 26959.4 |
| mfs transporter | DW204_11385 | Not Available | Negative | 2691316 - 2692581 | 45880.8 |
| capsule biosynthesis protein | DW204_11390 | Not Available | Negative | 2692604 - 2695051 | 88967.5 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DW204_11395 | Not Available | Negative | 2695420 - 2696532 | 41681.0 |
| n-acetylmuramoyl-l-alanine amidase | DW204_11400 | Not Available | Negative | 2696623 - 2697066 | 16660.0 |
| dna-binding protein | DW204_11405 | Not Available | Negative | 2697167 - 2697604 | 15756.8 |
| duf4248 domain-containing protein | DW204_11410 | Not Available | Negative | 2697851 - 2698120 | 10161.4 |
| virulence protein e | DW204_11415 | Not Available | Negative | 2698277 - 2700376 | 80269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

