Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | DW204_00990 | Not Available | Negative | 275626 - 276222 | 22944.7 |
| hypothetical protein | DW204_00995 | Not Available | Negative | 276219 - 276848 | 24235.0 |
| alanine:cation symporter family protein | DW204_01000 | Not Available | Negative | 276895 - 278295 | 50407.2 |
| atp-binding protein | DW204_01005 | Not Available | Negative | 278304 - 278945 | 24301.3 |
| serine dehydratase subunit alpha family protein | DW204_01010 | Not Available | Negative | 278958 - 280253 | 45789.4 |
| duf255 domain-containing protein | DW204_01015 | Not Available | Negative | 280259 - 282265 | 74173.3 |
| Trna-ser | Not Available | Not Available | Positive | 282538 - 282625 | Not Available |
| beta-n-acetylhexosaminidase | DW204_01025 | Not Available | Negative | 282853 - 284490 | 62151.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_01030 | Not Available | Negative | 284581 - 286422 | 69823.5 |
| tonb-dependent receptor | DW204_01035 | Not Available | Negative | 286436 - 289633 | 118372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

